If you build or tune your data files with Excel, you may use its 'Save As CSV file' or 'Save As tab delimited file' feature to get a text file with a tab separator between columns, which is a standard for input files in Capsis (e.g. inventory files, species files, soil compartment files, configuration or parameter files…).
The exported file may contain sections like this small extract:
#name1 name2 name3
1 12.5 {(0,65);(1,65);(2,65)}
But sometimes, you may instead get something with extra double quotes, looking like this:
#name1 name2 name3
1 12.5 "{(0,65);(1,65);(2,65)}"
and the file will not be read in Capsis.
This extra double quotes addition seems to be done by the 'Save As' feature in Excel. A workaround has been found to get the expected result, based on Copy and Paste, here is an example of how it can be done.
Below is an example of a complex input file with several different sections for the Samsara2 model, which can benefit from this simple Copy/Paste technique.
# Model : samsara2 # Author : Benoit Courbaud # Project : sam # Stand date : 2012 # Initial source # File format : # Name : Chargeur d'inventaires Samsara2 # Class name : samsara2.extension.ioformat.Samsa2Inventory # Version : 1.0 # Author : F. de Coligny # Samsa2InventoryExport # # Key records section # treeRecruitmentDbh = 0 date = 2010 cellWidth = 5 plotXMin = 0 plotYMin = 0 plotXMax = 125 plotYMax = 80 plotSlope = 0 plotAspect = 144 bottomAzimut = 270 canopyTop = 40 balRadius = 17 # Species parameters # # Spec. Spec. Spec Growth Growth Growth Growth Growth Height Height Height CBHeight CBHeight CBRadius CBRadius CBRadius Crown Crown Crown Sapl. Sapl. Sapl. Sapl. Sapl. Sapl. Sapl. Sapl. Sapl. Sapl. Mortal. Mortal. Mortal. Mortal. Mortal. Mortal. Storm Storm Storm # spCode spName Color VolRule LogA beta sigmaB sigmaLbda muLogK sigmaLogK r muLogK sigmaLogK muLogK sigmaLogK b shape Transmis HBc/H RainDensity repDbh Alpha1 Alpha2 Beta1 Beta2 Beta3 InitialHeight Rhg1 Rhg2 P1 P2 P3 P4 P5 HarvestDbh stormP1 stormP2 stormP3 0 Epicea 0,128,0 Algan8 -3.58 0.588 0.6 0.1049 3.53 0.1039 0.0767 0.488 0.6164 -0.774 0.1578 0.525 P 0.2 0.23 0 17.5 5 1 -2.23 0.215 -0.001102 0.08 0.98 17.8 -2.158 -0.066 0.058 -7.28 0.00034 300 -1.863 0.923 0.205 1 Sapin 0,0,128 Algan8 -1.347 0.416 0.6025 0.1844 3.28 0.1766 0.0846 0.714 0.4615 -0.354 0.1217 0.454 P 0.2 0.23 0 17.5 5 1 -2.38 0.24 -0.002107 0.08 0.67 0.5 -2.158 -0.066 0.058 -7.28 0.00034 300 -1.599 1.47 0.015 2 Hetre 128,0,0 Algan8 -1.5 0.4 0.6025 0.1844 3.0115 0.1432 0.0996 0.1939 0.6583 -1.086 0.1489 0.725 E 0.2 0.23 0 17.5 51 1 -1.9 0.213 -0.002985 0.08 1.49 7.39 -2.158 -0.066 0.058 -7.28 0.00034 300 -3.057 0.941 0.231 3 Erable 136,66,29 Algan8 -2.19 0.4 0.6025 0.1844 2.8 0.1432 0.0996 0.1939 0.6583 -1.086 0.1489 0.725 E 0.2 0.23 0 17.5 51 1 -1.9 0.213 -0.002985 0.08 1.49 7.39 -2.158 -0.066 0.058 -7.28 0.00034 300 -3.057 0.941 0.231 4 Frene 240,195,0 Algan8 -2.19 0.4 0.6025 0.1844 2.8 0.1432 0.0996 0.1939 0.6583 -1.086 0.1489 0.725 E 0.2 0.23 0 17.5 51 1 -1.9 0.213 -0.002985 0.08 1.49 7.39 -2.158 -0.066 0.058 -7.28 0.00034 300 -3.057 0.941 0.231 5 Sorbier 223,109,20 Algan8 -2.19 0.4 0.6025 0.1844 2.5 0.1432 0.0996 0.1939 0.6583 -1.086 0.1489 0.725 E 0.2 0.23 0 17.5 51 1 -1.9 0.213 -0.002985 0.08 1.49 7.39 -2.158 -0.066 0.058 -7.28 0.00034 300 -3.057 0.941 0.231 6 Saule 187,174,152 Algan8 -2.19 0.4 0.6025 0.1844 2.5 0.1432 0.0996 0.1939 0.6583 -1.086 0.1489 0.725 E 0.2 0.23 0 17.5 51 1 -1.9 0.213 -0.002985 0.08 1.49 7.39 -2.158 -0.066 0.058 -7.28 0.00034 300 -3.057 0.941 0.231 7 Other 187,174,152 Algan8 -2.19 0.4 0.6025 0.1844 2.5 0.1432 0.0996 0.1939 0.6583 -1.086 0.1489 0.725 E 0.2 0.23 0 17.5 51 1 -1.9 0.213 -0.002985 0.08 1.49 7.39 -2.158 -0.066 0.058 -7.28 0.00034 300 -3.057 0.941 0.231 # Dead wood # # Log volumes (m3/ha) per Holeksa's dbh and decay classes # D / décomp fresh I.1 I.2 II III IV V VI VII VIII < 23 cm 1.2 1.2 1.2 1.2 1.2 1.2 1.2 1.2 1.2 1.2 23-35 cm 0.6 0.6 0.6 0.6 0.6 0.6 0.6 0.6 0.6 0.6 > 35 cm 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 # Dendro micro habitats # Catalogue TREM (Breed.Woodpecker,Rot.Hole,Dendrotelm,Root.Concav,Bark.Loss,Exposed.HeartWood,Crack,Crown.DeadWood,Burr.Canker,Polypore,Sap.Run) # # Parameters # TREM Sp K lambda Breed.Woodpecker 0 2 800 Rot.Hole 0 2 500 Dendrotelm 0 2 700 Root.Concav 0 2 200 Bark.Loss 0 2 400 Exposed.HeartWood 0 2 700 Crack 0 2 700 Crown.DeadWood 0 2 500 Burr.Canker 0 2 500 Polypore 0 2 800 Sap.Run 0 2 500 Breed.Woodpecker 1 2 800 Rot.Hole 1 2 500 Dendrotelm 1 2 700 Root.Concav 1 2 200 Bark.Loss 1 2 400 Exposed.HeartWood 1 2 700 Crack 1 2 700 Crown.DeadWood 1 2 500 Burr.Canker 1 2 500 Polypore 1 2 800 Sap.Run 1 2 500 Breed.Woodpecker 2 2 800 Rot.Hole 2 2 500 Dendrotelm 2 2 700 Root.Concav 2 2 200 Bark.Loss 2 2 400 Exposed.HeartWood 2 2 700 Crack 2 2 700 Crown.DeadWood 2 2 500 Burr.Canker 2 2 500 Polypore 2 2 800 Sap.Run 2 2 500 Breed.Woodpecker 3 2 800 Rot.Hole 3 2 500 Dendrotelm 3 2 700 Root.Concav 3 2 200 Bark.Loss 3 2 400 Exposed.HeartWood 3 2 700 Crack 3 2 700 Crown.DeadWood 3 2 500 Burr.Canker 3 2 500 Polypore 3 2 800 Sap.Run 3 2 500 Breed.Woodpecker 4 2 800 Rot.Hole 4 2 500 Dendrotelm 4 2 700 Root.Concav 4 2 200 Bark.Loss 4 2 400 Exposed.HeartWood 4 2 700 Crack 4 2 700 Crown.DeadWood 4 2 500 Burr.Canker 4 2 500 Polypore 4 2 800 Sap.Run 4 2 500 Breed.Woodpecker 5 2 800 Rot.Hole 5 2 500 Dendrotelm 5 2 700 Root.Concav 5 2 200 Bark.Loss 5 2 400 Exposed.HeartWood 5 2 700 Crack 5 2 700 Crown.DeadWood 5 2 500 Burr.Canker 5 2 500 Polypore 5 2 800 Sap.Run 5 2 500 Breed.Woodpecker 6 2 800 Rot.Hole 6 2 500 Dendrotelm 6 2 700 Root.Concav 6 2 200 Bark.Loss 6 2 400 Exposed.HeartWood 6 2 700 Crack 6 2 700 Crown.DeadWood 6 2 500 Burr.Canker 6 2 500 Polypore 6 2 800 Sap.Run 6 2 500 Breed.Woodpecker 7 2 800 Rot.Hole 7 2 500 Dendrotelm 7 2 700 Root.Concav 7 2 200 Bark.Loss 7 2 400 Exposed.HeartWood 7 2 700 Crack 7 2 700 Crown.DeadWood 7 2 500 Burr.Canker 7 2 500 Polypore 7 2 800 Sap.Run 7 2 500 # Tree records # # Id speciesId X Y Z Dbh H CBH CR Age REM LifeStage # (m) (m) (m) (cm) (m) (m) (m) (yr) (vector) (char) 1 2 0.69 76.56 44.3 4 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 10 2 25 76 44.1 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 100 2 32.27 64.09 37.85 68 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 101 2 40.43 61.55 36.62 54 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 102 2 43.37 60.33 37 27 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 103 2 46.84 59.46 37.73 54 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 104 1 47.61 57.06 35.57 69 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 105 2 55.37 59.82 37.13 35 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 106 2 55.49 59.54 37.11 46 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 107 1 69.09 59.3 38.43 72 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 108 1 80.15 59.18 39.46 92 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 109 0 79.96 62.72 41.65 33 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 11 3 37.6 78.3 45.99 44 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 110 2 84.06 64.13 42.66 68 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 111 1 84.93 63.14 42.18 10 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 112 1 88 60.85 41.52 71 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 113 2 85.05 59.53 40.15 31 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 114 2 87.54 56.93 39.77 68 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 115 2 88.11 57.12 39.71 1 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 116 2 88.31 57.47 39.52 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 117 1 91.14 58.36 40.46 70 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 118 1 95.2 59.98 41.92 38 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 119 2 97.49 59.12 42.14 60 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 12 3 37.44 77.93 45.56 7 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 120 2 102.45 59.98 43.58 69 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 121 1 102.04 59.16 42.87 1 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 122 1 101.82 61.63 44.04 4 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 123 2 103.19 63.87 45.59 53 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 124 2 109.72 59.79 45.13 63 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 125 2 117.55 55.68 44.36 27 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 126 2 117.21 55.65 44.22 20 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 127 2 116.4 55.45 43.19 12 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 128 7 119.82 58.83 45.61 4 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 129 0 119.87 54.89 43.54 40 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 13 3 37.41 76.92 44.99 24 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 130 1 124.64 55.33 45 12 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 131 0 123.54 51.53 42.93 56 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 132 1 118.03 53.08 42.38 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 133 1 124.14 48.45 41.04 55 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 134 2 117.83 47.61 38.6 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 135 1 113.09 46.56 37.58 96 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 136 2 106.96 52.09 39.74 54 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 137 1 106.39 53.59 40.36 35 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 138 2 99.33 51.93 38.33 69 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 139 1 99.12 51.84 38.16 101 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 14 1 45.09 76.91 45.84 72 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 140 1 98.25 47.53 35.12 83 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 141 2 93.77 48.52 35.39 101 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 142 2 85.96 55.82 39.02 1 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 143 1 86.09 54.09 37.93 61 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 144 1 84.06 48.31 34.21 44 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 145 2 80.04 50.55 34.85 56 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 146 2 79.64 50.4 34.37 4 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 147 2 75.15 55.09 36.73 54 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 148 2 73.9 49.73 33.48 59 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 149 2 73.56 49.19 33.14 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 15 1 53.49 73.75 45.18 59 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 150 2 73.95 49.53 33.34 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 151 1 66.4 50.1 33.22 70 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 152 1 63.25 54.58 35.56 63 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 153 1 60.86 53.01 34.04 63 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 154 1 62.73 46.48 30.84 9 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 155 1 60.54 48.65 31.63 7 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 156 1 61.39 46.84 30.71 1 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 157 1 55.29 54.09 33.84 1 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 158 2 55.91 48.54 31.33 68 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 159 2 51.23 52.71 32.95 1 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 16 2 57.29 72.93 45.11 21 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 160 1 50.36 53.07 32.92 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 161 2 50.28 49.53 31.07 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 162 2 50.33 49.2 30.78 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 163 2 41.77 53.58 32.75 27 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 164 2 41.61 56.97 34.08 24 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 165 2 40.48 55.71 33.63 44 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 166 2 38.97 51.09 31.03 15 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 167 2 38.69 50.77 30.7 53 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 168 2 39.37 50.82 30.71 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 169 2 38.63 50.54 30.06 15 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 17 2 61.82 74.1 46.17 43 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 170 2 41.08 48.24 29.6 31 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 171 1 30.86 57.33 33.75 27 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 172 1 27.42 55.64 32.62 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 173 1 29.06 56.38 33.73 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 174 2 31.25 49.79 29.01 100 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 175 2 25.9 55.66 33.18 27 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 176 3 29.15 45.87 27.03 15 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 177 1 25.62 48.81 29.26 87 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 178 1 19.97 48.42 29.41 69 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 179 1 18.66 47.1 28.78 40 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 18 1 60.99 75.68 47.11 76 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 180 1 17.22 46.91 28.75 70 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 181 1 17.16 46.51 28.32 12 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 182 2 11.09 50.34 30.41 13 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 183 1 11.55 43.53 26.64 21 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 184 3 11.84 42.67 26.18 13 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 185 7 8.26 50.09 30.62 4 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 186 2 1.54 42.63 26.16 68 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 187 1 22.59 36.52 23.03 84 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 188 1 21.46 35.42 22.71 40 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 189 2 22.21 34.72 21.39 27 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 19 1 65.28 76.05 47.67 33 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 190 1 23.51 33.79 21.55 21 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 191 1 23.4 32.89 19.82 80 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 192 2 42.52 32.27 20.66 15 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 193 1 41.94 33.58 21.39 61 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 194 2 42.27 34.55 22.1 31 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 195 2 54.17 38.79 26.54 55 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 196 1 56.63 38.88 26.82 83 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 197 1 64.29 34.22 24.07 93 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 198 1 65.4 32.73 23.5 101 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 199 2 74.1 30.43 22.45 53 NA NA NA NA (0,0,0,0,0,0,0,0,0,0,0) alive 2 1 3.26 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